#################################################################################################### # headers for forceps-export files #################################################################################################### #---- (headers_complete_export <- c( 'date', 'patchId', 'id', 'speciesId', 'speciesShortName', 'genotypeName', 'age', 'dbh_cm', 'height_m', 'volume_m3', 'crownA1', 'crownLength', 'dbhIncrement', 'slowGrowthIndex', 'foliageArea', 'LAI', 'lightAvailability', 'algf', 'leafUnfoldingDate', 'leafSenescenceDate', 'treeDroughtIndex', 'droughtIndexModifier', 'sureauClassId', 'hydraulicConductance', 'trunkApoplasmPLC', 'leafApoplasmPLC', 'trunkTurgorPressure', 'meanleafWaterStatus', 'meanStomatalClosure', 'yearlyTranspirationSum', 'frostDefoliationPercentage', 'droughtDefoliationPercentage', 'causeOfDeath', 'extractedBranchPercentage', 'rootDepth_m', 'fineRootArea_m2', 'rootShootRatio', 'droughtFactor', 'basalArea_m2', 'trunkBiomass_kg', 'branchBiomass_kg', 'foliageBiomass_kg', 'aboveGroundBiomass', 'fineRootBiomass_kg', 'rootBiomass_kg', 'totalBiomass_kg', 'trunkSurfaceArea_m2', 'numberOfTREMs', 'x', 'y' )) saveRDS(headers_complete_export, file = "headers_complete_export.Rds") #---- (headers_mean_stand_export <- c( 'date', 'nTrees.ha', 'totalBiomass_t.ha', 'totalBasalArea_m2.ha', 'meanHeight_m.ha', 'totalVolume_m3.ha', 'LAI', 'droughtIndexAnnual', 'droughtIndexSeasonal', 'winterTMIN_deg', 'GDDannual_deg.day', 'GDDseasonal_deg.day', 'nTreesMean', 'nTreesSD', 'biomassMean', 'biomassSD', 'basalAreaMean', 'basalAreaSD', 'heightMean', 'heightSD', 'volumeMean', 'volumeSD', 'yearlyTranspirationSum', 'maxMonthlySoilWaterQuantity', 'meanMonthlySoilWaterQuantity', 'minMonthlySoilWaterQuantity', 'actualHeightVCI', 'potentialHeightVCI', 'managementIds' )) saveRDS(headers_mean_stand_export, file = "headers_mean_stand_export.Rds") #---- (headers_IBP_export <- c( 'date', 'alphaVCI', 'betaVCI', 'gammaVCI', 'alphaSpeciesRichness', 'betaSpeciesRichness', 'gammaSpeciesRichness', 'alphaSpeciesShannonIndex', 'betaSpeciesShannonIndex', 'gammaSpeciesShannonIndex', 'alphaClumpingIndex', 'betaClumpingIndex', 'gammaClumpingIndex', 'dbh_Gini', 'height_Gini', 'alphaAncientness', 'betaAncientness', 'gammaAncientness', 'numberOfTREM', 'numberOfTREMTrees', 'basalArea_Gini', 'LAI_Gini', 'LAI_Openness', 'numberOfLiveVerySmallTrees', 'numberOfLiveSmallTrees', 'numberOfLiveMediumTrees', 'numberOfLiveLargeTrees', 'numberOfLiveVeryLargeTrees', 'numberOfLiveVeryVeryLargeTrees', 'numberOfStandingDeadVerySmallTrees', 'numberOfStandingDeadSmallTrees', 'numberOfStandingDeadMediumTrees', 'numberOfStandingDeadLargeTrees', 'numberOfStandingDeadVeryLargeTrees', 'numberOfStandingDeadVeryVeryLargeTrees', 'numberOfFallenDeadVerySmallTrees', 'numberOfFallenDeadSmallTrees', 'numberOfFallenDeadMediumTrees', 'numberOfFallenDeadLargeTrees', 'numberOfFallenDeadVeryLargeTrees', 'numberOfFallenDeadVeryVeryLargeTrees' )) saveRDS(headers_IBP_export, file = "headers_IBP_export.Rds") #---- (headers_cut_export <- c( 'dateOfCut', 'patchId', 'id', 'speciesId', 'speciesShortName', 'genotypeName', 'age', 'dbh_cm', 'height_m', 'volume_m3', 'extractedBranchPercentage', 'trunkBiomass_kg', 'branchBiomass_kg', 'foliageBiomass_kg', 'aboveGroundBiomass_kg', 'fineRootBiomass_kg', 'rootBiomass_kg', 'totalBiomass_kg', 'x', 'y' )) saveRDS(headers_cut_export, file = "headers_cut_export.Rds") #---- (headers_scene_deadwood_export <- c( 'date', 'speciesId', 'speciesName', 'genotypeName', 'fallenLeafBiomassStock', 'deadBranchBiomassStock', 'deadFineRootBiomassStock', 'deadLargeRootBiomassStock', 'deadStandingTreeBiomassStock', 'deadFallenTreeBiomassStock', 'yearFallenLeafBiomass', 'yearDeadBranchBiomass', 'yearDeadFineRootBiomass', 'yearDeadLargeRootBiomass', 'yearDeadStandingTreeBiomass', 'yearDeadFallenTreeBiomass', 'soilOrganicCarbonStock', 'soilCarbonEmission', 'soil_A_Compound_Stock', 'soil_W_Compound_Stock', 'soil_E_Compound_Stock', 'soil_N_Compound_Stock', 'soil_H_Compound_Stock', 'livingTrunkBiomassStock', 'livingBranchBiomassStock', 'livingLeafBiomassStock', 'livingFineRootBiomassStock', 'livingLargeRootBiomassStock', 'yearExtractedSnagBiomass' )) saveRDS(headers_scene_deadwood_export, file = "headers_scene_deadwood_export.Rds")