204 lines
4.4 KiB
R
204 lines
4.4 KiB
R
####################################################################################################
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# headers for forceps-export files
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####################################################################################################
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#----
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(headers_complete_export <- c(
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'date',
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'patchId',
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'id',
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'speciesId',
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'speciesShortName',
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'genotypeName',
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'age',
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'dbh_cm',
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'height_m',
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'volume_m3',
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'crownA1',
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'crownLength',
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'dbhIncrement',
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'slowGrowthIndex',
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'foliageArea',
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'LAI',
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'lightAvailability',
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'algf',
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'leafUnfoldingDate',
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'leafSenescenceDate',
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'treeDroughtIndex',
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'droughtIndexModifier',
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'sureauClassId',
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'hydraulicConductance',
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'trunkApoplasmPLC',
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'leafApoplasmPLC',
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'trunkTurgorPressure',
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'meanleafWaterStatus',
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'meanStomatalClosure',
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'yearlyTranspirationSum',
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'frostDefoliationPercentage',
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'droughtDefoliationPercentage',
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'causeOfDeath',
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'extractedBranchPercentage',
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'rootDepth_m',
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'fineRootArea_m2',
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'rootShootRatio',
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'droughtFactor',
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'basalArea_m2',
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'trunkBiomass_kg',
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'branchBiomass_kg',
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'foliageBiomass_kg',
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'aboveGroundBiomass',
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'fineRootBiomass_kg',
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'rootBiomass_kg',
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'totalBiomass_kg',
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'trunkSurfaceArea_m2',
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'numberOfTREMs',
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'x',
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'y'
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))
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saveRDS(headers_complete_export, file = "headers_complete_export.Rds")
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#----
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(headers_mean_stand_export <- c(
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'date',
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'nTrees.ha',
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'totalBiomass_t.ha',
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'totalBasalArea_m2.ha',
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'meanHeight_m.ha',
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'totalVolume_m3.ha',
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'LAI',
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'droughtIndexAnnual',
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'droughtIndexSeasonal',
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'winterTMIN_deg',
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'GDDannual_deg.day',
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'GDDseasonal_deg.day',
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'nTreesMean',
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'nTreesSD',
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'biomassMean',
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'biomassSD',
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'basalAreaMean',
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'basalAreaSD',
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'heightMean',
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'heightSD',
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'volumeMean',
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'volumeSD',
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'yearlyTranspirationSum',
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'maxMonthlySoilWaterQuantity',
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'meanMonthlySoilWaterQuantity',
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'minMonthlySoilWaterQuantity',
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'actualHeightVCI',
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'potentialHeightVCI',
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'managementIds'
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))
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saveRDS(headers_mean_stand_export, file = "headers_mean_stand_export.Rds")
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#----
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(headers_IBP_export <- c(
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'date',
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'alphaVCI',
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'betaVCI',
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'gammaVCI',
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'alphaSpeciesRichness',
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'betaSpeciesRichness',
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'gammaSpeciesRichness',
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'alphaSpeciesShannonIndex',
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'betaSpeciesShannonIndex',
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'gammaSpeciesShannonIndex',
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'alphaClumpingIndex',
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'betaClumpingIndex',
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'gammaClumpingIndex',
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'dbh_Gini',
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'height_Gini',
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'alphaAncientness',
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'betaAncientness',
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'gammaAncientness',
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'numberOfTREM',
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'numberOfTREMTrees',
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'basalArea_Gini',
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'LAI_Gini',
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'LAI_Openness',
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'numberOfLiveVerySmallTrees',
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'numberOfLiveSmallTrees',
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'numberOfLiveMediumTrees',
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'numberOfLiveLargeTrees',
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'numberOfLiveVeryLargeTrees',
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'numberOfLiveVeryVeryLargeTrees',
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'numberOfStandingDeadVerySmallTrees',
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'numberOfStandingDeadSmallTrees',
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'numberOfStandingDeadMediumTrees',
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'numberOfStandingDeadLargeTrees',
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'numberOfStandingDeadVeryLargeTrees',
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'numberOfStandingDeadVeryVeryLargeTrees',
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'numberOfFallenDeadVerySmallTrees',
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'numberOfFallenDeadSmallTrees',
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'numberOfFallenDeadMediumTrees',
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'numberOfFallenDeadLargeTrees',
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'numberOfFallenDeadVeryLargeTrees',
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'numberOfFallenDeadVeryVeryLargeTrees'
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))
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saveRDS(headers_IBP_export, file = "headers_IBP_export.Rds")
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#----
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(headers_cut_export <- c(
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'dateOfCut',
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'patchId',
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'id',
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'speciesId',
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'speciesShortName',
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'genotypeName',
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'age',
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'dbh_cm',
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'height_m',
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'volume_m3',
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'extractedBranchPercentage',
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'trunkBiomass_kg',
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'branchBiomass_kg',
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'foliageBiomass_kg',
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'aboveGroundBiomass_kg',
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'fineRootBiomass_kg',
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'rootBiomass_kg',
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'totalBiomass_kg',
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'x',
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'y'
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))
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saveRDS(headers_cut_export, file = "headers_cut_export.Rds")
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#----
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(headers_scene_deadwood_export <- c(
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'date',
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'speciesId',
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'speciesName',
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'genotypeName',
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'fallenLeafBiomassStock',
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'deadBranchBiomassStock',
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'deadFineRootBiomassStock',
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'deadLargeRootBiomassStock',
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'deadStandingTreeBiomassStock',
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'deadFallenTreeBiomassStock',
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'yearFallenLeafBiomass',
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'yearDeadBranchBiomass',
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'yearDeadFineRootBiomass',
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'yearDeadLargeRootBiomass',
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'yearDeadStandingTreeBiomass',
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'yearDeadFallenTreeBiomass',
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'soilOrganicCarbonStock',
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'soilCarbonEmission',
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'soil_A_Compound_Stock',
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'soil_W_Compound_Stock',
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'soil_E_Compound_Stock',
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'soil_N_Compound_Stock',
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'soil_H_Compound_Stock',
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'livingTrunkBiomassStock',
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'livingBranchBiomassStock',
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'livingLeafBiomassStock',
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'livingFineRootBiomassStock',
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'livingLargeRootBiomassStock',
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'yearExtractedSnagBiomass'
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))
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saveRDS(headers_scene_deadwood_export, file = "headers_scene_deadwood_export.Rds")
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